Difference between revisions of "TSS:Hg 103623.1"
From referenceTSS
| Line 6: | Line 6: | ||
|HSD17B5= | |HSD17B5= | ||
|PGFS= | |PGFS= | ||
| − | |all_trans= | + | |all_trans=LP747418:0 MB486558:0 BC001479:0 D17793:0 AB018580:7 ENST00000480697.6:15 ENST00000380554.5:15 NM_003739:15 NM_001253909:15 AK296701:15 AK315411:17 AK290365:17 ENST00000605322.1:19 AK310940:19 BC019230:23 S68288:36 AF149416:40 CU674730:46 CU676394:46 AM392923:46 KJ892585:46 KJ897885:46 KR710495:46 DQ893860:46 GQ129450:46 GQ129451:46 AB383754:46 BT007286:46 DQ890679:46 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-31 |
|end=5094399 | |end=5094399 | ||
|end_of_center_position=5094384 | |end_of_center_position=5094384 | ||
|entrez_id=8644 | |entrez_id=8644 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=DD3 | + | |gene_alias=DD3{{!}}DDX{{!}}HA1753{{!}}HAKRB{{!}}HAKRe{{!}}HSD17B5{{!}}PGFS{{!}}hluPGFS |
|gene_description=aldo-keto reductase family 1 member C3 | |gene_description=aldo-keto reductase family 1 member C3 | ||
|gene_id=8644 | |gene_id=8644 | ||
| − | |gene_name= | + | |gene_name=aldo-keto reductase family 1 member C3 |
|gene_source=HGNC:386 | |gene_source=HGNC:386 | ||
|gene_symbol=AKR1C3 | |gene_symbol=AKR1C3 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_003739 | |nearest_refseq=NM_003739 | ||
|nearest_unigene=Hs.78183 | |nearest_unigene=Hs.78183 | ||
| − | |num_trans= | + | |num_trans=29 |
|species=human | |species=human | ||
|start=5094367 | |start=5094367 | ||
|start_of_center_position=5094383 | |start_of_center_position=5094383 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-94(GACCATATAAGA,-,0.00) |
| − | |transcript_name= | + | |transcript_name=LP747418 MB486558 BC001479 D17793 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103623.1 | |tss_id=hg_103623.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5094383 |
|---|---|
| End of the center position in the TSS region: | 5094384 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LP747418 MB486558 BC001479 D17793 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | LP747418:0 MB486558:0 BC001479:0 D17793:0 AB018580:7 ENST00000480697.6:15 ENST00000380554.5:15 NM_003739:15 NM_001253909:15 AK296701:15 AK315411:17 AK290365:17 ENST00000605322.1:19 AK310940:19 BC019230:23 S68288:36 AF149416:40 CU674730:46 CU676394:46 AM392923:46 KJ892585:46 KJ897885:46 KR710495:46 DQ893860:46 GQ129450:46 GQ129451:46 AB383754:46 BT007286:46 DQ890679:46 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NM_003739 |
| Entrez ID: | 8644 |
| Nearest Unigene: | Hs.78183 |
| Nearest Refseq: | NM_003739 |
| Nearest Ensembl: | ENSG00000196139 |
| Gene Name: | aldo-keto reductase family 1 member C3 |
| Gene Alias: | DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS |
| Gene Description: | aldo-keto reductase family 1 member C3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -94(GACCATATAAGA,-,0.00) |
