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Difference between revisions of "TSS:Hg 103631.1"

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Line 4: Line 4:
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.01
 
|cpg_percent=0.01
|distance=
+
|distance=NA
|distance_to_tss=-72346
+
|distance_to_tss=-21427
 
|end=5292677
 
|end=5292677
|entrez_id=114131
+
|end_of_center_position=5292664
 +
|entrez_id=110806285
 
|gc_percent=0.522388
 
|gc_percent=0.522388
|gene_alias=SCP|SPC|UCNIII
+
|gene_alias=-
|gene_description=urocortin 3
+
|gene_description=long intergenic non-protein coding RNA 2561
|gene_name=UCN3
+
|gene_name=LINC02561
|gene_type=protein-coding
+
|gene_type=ncRNA
|nearest_ensembl=ENSG00000178473
+
|nearest_ensembl=ENSG00000224034
|nearest_promoter_id=NM_053049
+
|nearest_promoter_id=NR_149060
|nearest_refseq=NM_053049
+
|nearest_refseq=NR_149060
|nearest_unigene=Hs.511775
+
|nearest_unigene=
 
|num_trans=0
 
|num_trans=0
 
|species=human
 
|species=human
 
|start=5292649
 
|start=5292649
 +
|start_of_center_position=5292663
 
|strand=+
 
|strand=+
 
|transcript_name=
 
|transcript_name=

Latest revision as of 17:31, 15 June 2021

Basic information about the TSS


TSS ID:hg_103631.1
Species:human
Chr:chr10
TSS Classification:no
Start:5292649
End:5292677
Strand:+
TSS Score:1
Start of the center position in the TSS region:5292663
End of the center position in the TSS region:5292664



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:LINC02561
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:



TATA-Box annotation


Distance to TSS:-21427
Nearest PromoterID:NR_149060
Entrez ID:110806285
Nearest Unigene:
Nearest Refseq:NR_149060
Nearest Ensembl:ENSG00000224034
Gene Name:LINC02561
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 2561
Gene Type:ncRNA
CpG%:0.01
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):