Difference between revisions of "TSS:Hg 103658.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|RABGDIB= | |RABGDIB= | ||
| − | |all_trans=ENST00000608273 | + | |all_trans=ENST00000608273.1:306 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=-102 | |distance_to_tss=-102 | ||
|end=5813679 | |end=5813679 | ||
| + | |end_of_center_position=5813651 | ||
|entrez_id=2665 | |entrez_id=2665 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=HEL-S-46e | + | |gene_alias=HEL-S-46e{{!}}RABGDIB |
|gene_description=GDP dissociation inhibitor 2 | |gene_description=GDP dissociation inhibitor 2 | ||
|gene_name=GDI2 | |gene_name=GDI2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000057608 | |nearest_ensembl=ENSG00000057608 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001115156 |
|nearest_refseq=NM_001494 | |nearest_refseq=NM_001494 | ||
|nearest_unigene=Hs.299055 | |nearest_unigene=Hs.299055 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=5813622 | |start=5813622 | ||
| + | |start_of_center_position=5813650 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000608273 | + | |transcript_name=ENST00000608273.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103658.1 | |tss_id=hg_103658.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:32, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5813650 |
|---|---|
| End of the center position in the TSS region: | 5813651 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000608273.1 |
|---|---|
| Distance: | 306 |
| Num_trans: | 1 |
| All_trans: | ENST00000608273.1:306 |
TATA-Box annotation
| Distance to TSS: | -102 |
|---|---|
| Nearest PromoterID: | NM_001115156 |
| Entrez ID: | 2665 |
| Nearest Unigene: | Hs.299055 |
| Nearest Refseq: | NM_001494 |
| Nearest Ensembl: | ENSG00000057608 |
| Gene Name: | GDI2 |
| Gene Alias: | HEL-S-46e|RABGDIB |
| Gene Description: | GDP dissociation inhibitor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
