Difference between revisions of "TSS:Hg 103666.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-105 |entrez_id=3601 |gc_percent=0.746269 |gene_alias=CD215 |gene_description=interleukin 15 receptor subunit alpha |gene_name=...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK125014:0 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=-105 | |distance_to_tss=-105 | ||
| + | |end=5977719 | ||
| + | |end_of_center_position=5977716 | ||
|entrez_id=3601 | |entrez_id=3601 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| Line 9: | Line 14: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000134470 | |nearest_ensembl=ENSG00000134470 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001256765 |
|nearest_refseq=NM_002189 | |nearest_refseq=NM_002189 | ||
|nearest_unigene=Hs.445124 | |nearest_unigene=Hs.445124 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=5977712 | ||
| + | |start_of_center_position=5977715 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK125014 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103666.1 | |tss_id=hg_103666.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5977715 |
|---|---|
| End of the center position in the TSS region: | 5977716 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK125014 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | AK125014:0 |
TATA-Box annotation
| Distance to TSS: | -105 |
|---|---|
| Nearest PromoterID: | NM_001256765 |
| Entrez ID: | 3601 |
| Nearest Unigene: | Hs.445124 |
| Nearest Refseq: | NM_002189 |
| Nearest Ensembl: | ENSG00000134470 |
| Gene Name: | IL15RA |
| Gene Alias: | CD215 |
| Gene Description: | interleukin 15 receptor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
