Difference between revisions of "TSS:Hg 103682.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=KJ903819:-109 BC008131:-377 | + | |all_trans=LF346122:34 MA581699:34 KJ903819:-109 LF346124:-223 MA581701:-223 BC008131:-377 LF346125:-384 MA581702:-384 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=34 |
|distance_to_tss=-19892 | |distance_to_tss=-19892 | ||
|end=6172159 | |end=6172159 | ||
| Line 17: | Line 17: | ||
|nearest_refseq=NR_039698 | |nearest_refseq=NR_039698 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=6172148 | |start=6172148 | ||
|start_of_center_position=6172153 | |start_of_center_position=6172153 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF346122 MA581699 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103682.1 | |tss_id=hg_103682.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:32, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6172153 |
|---|---|
| End of the center position in the TSS region: | 6172154 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF346122 MA581699 |
|---|---|
| Distance: | 34 |
| Num_trans: | 8 |
| All_trans: | LF346122:34 MA581699:34 KJ903819:-109 LF346124:-223 MA581701:-223 BC008131:-377 LF346125:-384 MA581702:-384 |
TATA-Box annotation
| Distance to TSS: | -19892 |
|---|---|
| Nearest PromoterID: | NR_039698 |
| Entrez ID: | 100628560 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039698 |
| Nearest Ensembl: | ENSG00000283634 |
| Gene Name: | MIR3155B |
| Gene Alias: | hsa-mir-3155b |
| Gene Description: | microRNA 3155b |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
