Difference between revisions of "TSS:Hg 103727.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000436383.1: | + | |all_trans=ENST00000648093.1:7 ENST00000436383.2:28 ENST00000648637.1:38 ENST00000649625.1:44 ENST00000650412.1:46 ENST00000648398.1:46 NR_038291:56 AK094154:56 ENST00000649110.1:64 ENST00000650205.1:66 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=7 |
|distance_to_tss=-57 | |distance_to_tss=-57 | ||
|end=6779542 | |end=6779542 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038291 | |nearest_refseq=NR_038291 | ||
|nearest_unigene=Hs.498571 | |nearest_unigene=Hs.498571 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=6779539 | |start=6779539 | ||
|start_of_center_position=6779540 | |start_of_center_position=6779540 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000648093.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103727.1 | |tss_id=hg_103727.1 | ||
Revision as of 17:33, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6779540 |
|---|---|
| End of the center position in the TSS region: | 6779541 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000648093.1 |
|---|---|
| Distance: | 7 |
| Num_trans: | 10 |
| All_trans: | ENST00000648093.1:7 ENST00000436383.2:28 ENST00000648637.1:38 ENST00000649625.1:44 ENST00000650412.1:46 ENST00000648398.1:46 NR_038291:56 AK094154:56 ENST00000649110.1:64 ENST00000650205.1:66 |
TATA-Box annotation
| Distance to TSS: | -57 |
|---|---|
| Nearest PromoterID: | NR_038291 |
| Entrez ID: | 100507127 |
| Nearest Unigene: | Hs.498571 |
| Nearest Refseq: | NR_038291 |
| Nearest Ensembl: | ENSG00000238266 |
| Gene Name: | long intergenic non-protein coding RNA 707 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 707 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
