Difference between revisions of "TSS:Hg 103729.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000650205.1:-13 ENST00000649110.1:-15 NR_038291:-23 AK094154:-23 ENST00000650412.1:-33 ENST00000648398.1:-33 ENST00000649625.1:-35 ENST00000648637.1:-41 ENST00000436383.2:-51 ENST00000648093.1:-72 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance=- | + | |distance=-13 |
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=6779637 | |end=6779637 | ||
| Line 12: | Line 12: | ||
|gene_description=long intergenic non-protein coding RNA 707 | |gene_description=long intergenic non-protein coding RNA 707 | ||
|gene_id=100507127 | |gene_id=100507127 | ||
| − | |gene_name= | + | |gene_name=LINC00707 |
|gene_source=HGNC:44691 | |gene_source=HGNC:44691 | ||
|gene_symbol=LINC00707 | |gene_symbol=LINC00707 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038291 | |nearest_refseq=NR_038291 | ||
|nearest_unigene=Hs.498571 | |nearest_unigene=Hs.498571 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=6779620 | |start=6779620 | ||
|start_of_center_position=6779628 | |start_of_center_position=6779628 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000650205.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103729.1 | |tss_id=hg_103729.1 | ||
Latest revision as of 17:33, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6779628 |
|---|---|
| End of the center position in the TSS region: | 6779629 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000650205.1 |
|---|---|
| Distance: | -13 |
| Num_trans: | 10 |
| All_trans: | ENST00000650205.1:-13 ENST00000649110.1:-15 NR_038291:-23 AK094154:-23 ENST00000650412.1:-33 ENST00000648398.1:-33 ENST00000649625.1:-35 ENST00000648637.1:-41 ENST00000436383.2:-51 ENST00000648093.1:-72 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NR_038291 |
| Entrez ID: | 100507127 |
| Nearest Unigene: | Hs.498571 |
| Nearest Refseq: | NR_038291 |
| Nearest Ensembl: | ENSG00000238266 |
| Gene Name: | LINC00707 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 707 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
