Difference between revisions of "TSS:Hg 103780.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000643001.1:125 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=125 |
|distance_to_tss=7243 | |distance_to_tss=7243 | ||
|end=8045253 | |end=8045253 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=GATA3 antisense RNA 1 | |gene_description=GATA3 antisense RNA 1 | ||
| − | |gene_name=GATA3 | + | |gene_id=2625 |
| + | |gene_name=GATA binding protein 3 | ||
| + | |gene_source=HGNC:4172 | ||
| + | |gene_symbol=GATA3 | ||
| + | |gene_synonyms=HDR | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:4172 | ||
|nearest_ensembl=ENSG00000197308 | |nearest_ensembl=ENSG00000197308 | ||
|nearest_promoter_id=NR_104329 | |nearest_promoter_id=NR_104329 | ||
|nearest_refseq=NM_207423 | |nearest_refseq=NM_207423 | ||
|nearest_unigene=Hs.158992 | |nearest_unigene=Hs.158992 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=8045242 | |start=8045242 | ||
|start_of_center_position=8045247 | |start_of_center_position=8045247 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000643001.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103780.1 | |tss_id=hg_103780.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A2R8Y4T2 | ||
}} | }} | ||
Revision as of 17:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8045247 |
|---|---|
| End of the center position in the TSS region: | 8045248 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000643001.1 |
|---|---|
| Distance: | 125 |
| Num_trans: | 1 |
| All_trans: | ENST00000643001.1:125 |
TATA-Box annotation
| Distance to TSS: | 7243 |
|---|---|
| Nearest PromoterID: | NR_104329 |
| Entrez ID: | 399717 |
| Nearest Unigene: | Hs.158992 |
| Nearest Refseq: | NM_207423 |
| Nearest Ensembl: | ENSG00000197308 |
| Gene Name: | GATA binding protein 3 |
| Gene Alias: | - |
| Gene Description: | GATA3 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
