Difference between revisions of "TSS:Hg 103795.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HDRS= | |HDRS= | ||
| − | |all_trans=X55122:70 X58072:119 X55037:144 M69106:149 AB463676:268 AM392571:269 AM392688:269 CU678358:270 KJ905755:270 KJ896866:271 | + | |all_trans=X55122:70 X58072:119 X55037:144 M69106:149 AB463676:268 AM392571:269 AM392688:269 CU678358:270 KJ905755:270 KJ896866:271 LF211783:-380 MA447360:-380 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=70 | |distance=70 | ||
| − | |distance_to_tss= | + | |distance_to_tss=684 |
|end=8055385 | |end=8055385 | ||
|end_of_center_position=8055372 | |end_of_center_position=8055372 | ||
|entrez_id=2625 | |entrez_id=2625 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=HDR | + | |gene_alias=HDR{{!}}HDRS |
|gene_description=GATA binding protein 3 | |gene_description=GATA binding protein 3 | ||
|gene_id=2625 | |gene_id=2625 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:4172 | |hgnc_mgi_id=HGNC:4172 | ||
|nearest_ensembl=ENSG00000107485 | |nearest_ensembl=ENSG00000107485 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_002051 |
|nearest_refseq=NM_002051 | |nearest_refseq=NM_002051 | ||
|nearest_unigene=Hs.524134 | |nearest_unigene=Hs.524134 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=8055358 | |start=8055358 | ||
Revision as of 17:35, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8055371 |
|---|---|
| End of the center position in the TSS region: | 8055372 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | X55122 |
|---|---|
| Distance: | 70 |
| Num_trans: | 12 |
| All_trans: | X55122:70 X58072:119 X55037:144 M69106:149 AB463676:268 AM392571:269 AM392688:269 CU678358:270 KJ905755:270 KJ896866:271 LF211783:-380 MA447360:-380 |
TATA-Box annotation
| Distance to TSS: | 684 |
|---|---|
| Nearest PromoterID: | NM_002051 |
| Entrez ID: | 2625 |
| Nearest Unigene: | Hs.524134 |
| Nearest Refseq: | NM_002051 |
| Nearest Ensembl: | ENSG00000107485 |
| Gene Name: | GATA binding protein 3 |
| Gene Alias: | HDR|HDRS |
| Gene Description: | GATA binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
