Difference between revisions of "TSS:Hg 103801.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |HDRS= | ||
| + | |all_trans=KJ896866:-130 CU678358:-131 KJ905755:-131 AM392571:-132 AM392688:-132 AB463676:-133 M69106:-252 X55037:-257 X58072:-282 X55122:-331 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance_to_tss= | + | |distance=-130 |
| + | |distance_to_tss=1131 | ||
| + | |end=8055853 | ||
| + | |end_of_center_position=8055820 | ||
|entrez_id=2625 | |entrez_id=2625 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=HDR | + | |gene_alias=HDR{{!}}HDRS |
|gene_description=GATA binding protein 3 | |gene_description=GATA binding protein 3 | ||
|gene_name=GATA3 | |gene_name=GATA3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000107485 | |nearest_ensembl=ENSG00000107485 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_002051 |
|nearest_refseq=NM_002051 | |nearest_refseq=NM_002051 | ||
|nearest_unigene=Hs.524134 | |nearest_unigene=Hs.524134 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=8055785 | ||
| + | |start_of_center_position=8055819 | ||
| + | |strand=+ | ||
| + | |transcript_name=KJ896866 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103801.1 | |tss_id=hg_103801.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:35, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 8055819 |
|---|---|
| End of the center position in the TSS region: | 8055820 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | KJ896866 |
|---|---|
| Distance: | -130 |
| Num_trans: | 10 |
| All_trans: | KJ896866:-130 CU678358:-131 KJ905755:-131 AM392571:-132 AM392688:-132 AB463676:-133 M69106:-252 X55037:-257 X58072:-282 X55122:-331 |
TATA-Box annotation
| Distance to TSS: | 1131 |
|---|---|
| Nearest PromoterID: | NM_002051 |
| Entrez ID: | 2625 |
| Nearest Unigene: | Hs.524134 |
| Nearest Refseq: | NM_002051 |
| Nearest Ensembl: | ENSG00000107485 |
| Gene Name: | GATA3 |
| Gene Alias: | HDR|HDRS |
| Gene Description: | GATA binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
