Difference between revisions of "TSS:Hg 103821.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000456526.1:-41 | + | |all_trans=ENST00000456526.1:-41 LP895776:-41 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=72182 | |distance_to_tss=72182 | ||
|end=8970176 | |end=8970176 | ||
| + | |end_of_center_position=8970171 | ||
|entrez_id=105755953 | |entrez_id=105755953 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2676 |
| − | |gene_name= | + | |gene_name=LINC02676 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000234752 | |nearest_ensembl=ENSG00000234752 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=8970165 | |start=8970165 | ||
| + | |start_of_center_position=8970170 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000456526.1 | + | |transcript_name=ENST00000456526.1 LP895776 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103821.1 | |tss_id=hg_103821.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8970170 |
|---|---|
| End of the center position in the TSS region: | 8970171 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000456526.1 LP895776 |
|---|---|
| Distance: | -41 |
| Num_trans: | 2 |
| All_trans: | ENST00000456526.1:-41 LP895776:-41 |
TATA-Box annotation
| Distance to TSS: | 72182 |
|---|---|
| Nearest PromoterID: | NR_131944 |
| Entrez ID: | 105755953 |
| Nearest Unigene: | Hs.564146 |
| Nearest Refseq: | NR_131944 |
| Nearest Ensembl: | ENSG00000234752 |
| Gene Name: | LINC02676 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2676 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
