Difference between revisions of "TSS:Hg 10389.1"
From referenceTSS
| Line 4: | Line 4: | ||
|SDR1= | |SDR1= | ||
|SDR16C1= | |SDR16C1= | ||
| − | |all_trans= | + | |all_trans=BX648476:-8 AK312961:23 AK309282:27 AY358093:71 AK310202:76 BC002730:246 AK222593:307 AF061741:308 CU678154:360 KJ897985:361 DQ893006:361 DQ896252:361 DQ426869:366 ENST00000616661.5:-487 NM_004753:-487 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=-8 | |distance=-8 | ||
| − | |distance_to_tss= | + | |distance_to_tss=494 |
|end=12617723 | |end=12617723 | ||
|end_of_center_position=12617716 | |end_of_center_position=12617716 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=DD83.1 | + | |gene_alias=DD83.1{{!}}RDH17{{!}}Rsdr1{{!}}SDR1{{!}}SDR16C1{{!}}retSDR1 |
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
|gene_id=9249 | |gene_id=9249 | ||
| − | |gene_name=dehydrogenase/reductase | + | |gene_name=dehydrogenase/reductase 3 |
|gene_source=HGNC:17693 | |gene_source=HGNC:17693 | ||
|gene_symbol=DHRS3 | |gene_symbol=DHRS3 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004753 | |nearest_refseq=NM_004753 | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
| − | |num_trans= | + | |num_trans=15 |
|retSDR1= | |retSDR1= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=12617715 | |start_of_center_position=12617715 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BX648476 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10389.1 | |tss_id=hg_10389.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:37, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12617715 |
|---|---|
| End of the center position in the TSS region: | 12617716 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX648476 |
|---|---|
| Distance: | -8 |
| Num_trans: | 15 |
| All_trans: | BX648476:-8 AK312961:23 AK309282:27 AY358093:71 AK310202:76 BC002730:246 AK222593:307 AF061741:308 CU678154:360 KJ897985:361 DQ893006:361 DQ896252:361 DQ426869:366 ENST00000616661.5:-487 NM_004753:-487 |
TATA-Box annotation
| Distance to TSS: | 494 |
|---|---|
| Nearest PromoterID: | NM_004753 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase 3 |
| Gene Alias: | DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
