Difference between revisions of "TSS:Hg 103903.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000277570.10:0 ENST00000622831.4:0 NM_153256:0 BC017269:0 BC048800:0 ENST00000474155.1:-10 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=24 |
|end=11823412 | |end=11823412 | ||
|end_of_center_position=11823381 | |end_of_center_position=11823381 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_153256 | |nearest_refseq=NM_153256 | ||
|nearest_unigene=Hs.435775 | |nearest_unigene=Hs.435775 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=11823348 | |start=11823348 | ||
|start_of_center_position=11823380 | |start_of_center_position=11823380 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000622831.4 | + | |transcript_name=ENST00000277570.10 ENST00000622831.4 NM_153256 BC017269 BC048800 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103903.1 | |tss_id=hg_103903.1 | ||
Revision as of 17:37, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11823380 |
|---|---|
| End of the center position in the TSS region: | 11823381 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000277570.10 ENST00000622831.4 NM_153256 BC017269 BC048800 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000277570.10:0 ENST00000622831.4:0 NM_153256:0 BC017269:0 BC048800:0 ENST00000474155.1:-10 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_153256 |
| Entrez ID: | 254427 |
| Nearest Unigene: | Hs.435775 |
| Nearest Refseq: | NM_153256 |
| Nearest Ensembl: | ENSG00000148426 |
| Gene Name: | proline and serine rich 2 |
| Gene Alias: | C10orf47 |
| Gene Description: | proline and serine rich 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
