Difference between revisions of "TSS:Hg 103913.1"
From referenceTSS
| Line 2: | Line 2: | ||
|YSA1H= | |YSA1H= | ||
|YSAH1= | |YSAH1= | ||
| − | |all_trans=ENST00000467016.1:0 ENST00000378900.6:0 ENST00000442050.5:0 | + | |all_trans=ENST00000281141.9:0 ENST00000467016.1:0 ENST00000378900.6:0 ENST00000442050.5:0 NM_006023:0 U27112:0 AK308790:0 BC009598:0 BC001600:0 AK289362:0 CR456966:4 KJ892641:4 ENST00000455773.7:-43 AK225634:-177 D14878:-207 ENST00000429258.6:-208 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=19 |
|end=12196242 | |end=12196242 | ||
|end_of_center_position=12196208 | |end_of_center_position=12196208 | ||
| − | |entrez_id= | + | |entrez_id=8872 |
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias= | + | |gene_alias=C10orf7{{!}}D123 |
| − | |gene_description= | + | |gene_description=cell division cycle 123 |
|gene_id=8872 | |gene_id=8872 | ||
|gene_name=cell division cycle 123 | |gene_name=cell division cycle 123 | ||
| Line 21: | Line 21: | ||
|hNUDT5= | |hNUDT5= | ||
|hgnc_mgi_id=HGNC:16827 | |hgnc_mgi_id=HGNC:16827 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000151465 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006023 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006023 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.412842 |
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=12196172 | |start=12196172 | ||
|start_of_center_position=12196207 | |start_of_center_position=12196207 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000467016.1 ENST00000378900.6 ENST00000442050.5 | + | |transcript_name=ENST00000281141.9 ENST00000467016.1 ENST00000378900.6 ENST00000442050.5 NM_006023 U27112 AK308790 BC009598 BC001600 AK289362 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103913.1 | |tss_id=hg_103913.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=X6RA30 X6RF82 | + | |uniprot_id=O75794 X6RA30 X6RF82 |
}} | }} | ||
Revision as of 17:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12196207 |
|---|---|
| End of the center position in the TSS region: | 12196208 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000281141.9 ENST00000467016.1 ENST00000378900.6 ENST00000442050.5 NM_006023 U27112 AK308790 BC009598 BC001600 AK289362 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000281141.9:0 ENST00000467016.1:0 ENST00000378900.6:0 ENST00000442050.5:0 NM_006023:0 U27112:0 AK308790:0 BC009598:0 BC001600:0 AK289362:0 CR456966:4 KJ892641:4 ENST00000455773.7:-43 AK225634:-177 D14878:-207 ENST00000429258.6:-208 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_006023 |
| Entrez ID: | 8872 |
| Nearest Unigene: | Hs.412842 |
| Nearest Refseq: | NM_006023 |
| Nearest Ensembl: | ENSG00000151465 |
| Gene Name: | cell division cycle 123 |
| Gene Alias: | C10orf7|D123 |
| Gene Description: | cell division cycle 123 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
