Difference between revisions of "TSS:Hg 103943.1"
From referenceTSS
| Line 2: | Line 2: | ||
|DNA43= | |DNA43= | ||
|PRO2249= | |PRO2249= | ||
| − | |all_trans=ENST00000378714. | + | |all_trans=ENST00000378714.8:0 ENST00000479669.5:0 ENST00000484800.6:0 NM_018518:0 NM_182751:0 AK292701:0 AK055695:0 BC101727:0 AB042719:0 AL136840:1 BC143490:2 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=13161587 | |end=13161587 | ||
|end_of_center_position=13161566 | |end_of_center_position=13161566 | ||
|entrez_id=55388 | |entrez_id=55388 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=CNA43 | + | |gene_alias=CNA43{{!}}DNA43{{!}}PRO2249 |
|gene_description=minichromosome maintenance 10 replication initiation factor | |gene_description=minichromosome maintenance 10 replication initiation factor | ||
|gene_id=55388 | |gene_id=55388 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:18043 | |hgnc_mgi_id=HGNC:18043 | ||
|nearest_ensembl=ENSG00000065328 | |nearest_ensembl=ENSG00000065328 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_018518 |
|nearest_refseq=NM_018518 | |nearest_refseq=NM_018518 | ||
|nearest_unigene=Hs.198363 | |nearest_unigene=Hs.198363 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=13161543 | |start=13161543 | ||
|start_of_center_position=13161565 | |start_of_center_position=13161565 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000378714. | + | |transcript_name=ENST00000378714.8 ENST00000479669.5 ENST00000484800.6 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103943.1 | |tss_id=hg_103943.1 | ||
Revision as of 17:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13161565 |
|---|---|
| End of the center position in the TSS region: | 13161566 |
Gene and protein annotation
|
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Transcript annotation
| Transcript_name: | ENST00000378714.8 ENST00000479669.5 ENST00000484800.6 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000378714.8:0 ENST00000479669.5:0 ENST00000484800.6:0 NM_018518:0 NM_182751:0 AK292701:0 AK055695:0 BC101727:0 AB042719:0 AL136840:1 BC143490:2 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_018518 |
| Entrez ID: | 55388 |
| Nearest Unigene: | Hs.198363 |
| Nearest Refseq: | NM_018518 |
| Nearest Ensembl: | ENSG00000065328 |
| Gene Name: | minichromosome maintenance 10 replication initiation factor |
| Gene Alias: | CNA43|DNA43|PRO2249 |
| Gene Description: | minichromosome maintenance 10 replication initiation factor |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
