Difference between revisions of "TSS:Hg 103957.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-16038 |entrez_id=55691 |gc_percent=0.457711 |gene_alias=CCAFCA|FRMD4|bA295P9.4 |gene_description=FERM domain containing 4A |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FRMD4= | ||
| + | |bA295P9.4= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-16021 | ||
| + | |end=14024581 | ||
| + | |end_of_center_position=14024571 | ||
|entrez_id=55691 | |entrez_id=55691 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=CCAFCA | + | |gene_alias=CCAFCA{{!}}FRMD4{{!}}bA295P9.4 |
|gene_description=FERM domain containing 4A | |gene_description=FERM domain containing 4A | ||
|gene_name=FRMD4A | |gene_name=FRMD4A | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_018027 | |nearest_refseq=NM_018027 | ||
|nearest_unigene=Hs.330463 | |nearest_unigene=Hs.330463 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=14024560 | ||
| + | |start_of_center_position=14024570 | ||
| + | |strand=+ | ||
| + | |tata_box=-26(ACCCTTAAAAGA,-,0.00),-25(CCCTTAAAAGAA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103957.1 | |tss_id=hg_103957.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14024570 |
|---|---|
| End of the center position in the TSS region: | 14024571 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -16021 |
|---|---|
| Nearest PromoterID: | NM_001318336 |
| Entrez ID: | 55691 |
| Nearest Unigene: | Hs.330463 |
| Nearest Refseq: | NM_018027 |
| Nearest Ensembl: | ENSG00000151474 |
| Gene Name: | FRMD4A |
| Gene Alias: | CCAFCA|FRMD4|bA295P9.4 |
| Gene Description: | FERM domain containing 4A |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -26(ACCCTTAAAAGA,-,0.00),-25(CCCTTAAAAGAA,+,0.00) |
