Difference between revisions of "TSS:Hg 103971.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-21350 |entrez_id=100302116 |gc_percent=0.437811 |gene_alias=MIRN1265|hsa-mir-1265 |gene_description=microRNA 1265 |gene_name=M...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=-21350 | |distance_to_tss=-21350 | ||
| + | |end=14415227 | ||
| + | |end_of_center_position=14415227 | ||
|entrez_id=100302116 | |entrez_id=100302116 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=MIRN1265 | + | |gene_alias=MIRN1265{{!}}hsa-mir-1265 |
|gene_description=microRNA 1265 | |gene_description=microRNA 1265 | ||
|gene_name=MIR1265 | |gene_name=MIR1265 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hsa-mir-1265= | ||
|nearest_ensembl=ENSG00000221371 | |nearest_ensembl=ENSG00000221371 | ||
|nearest_promoter_id=NR_031668 | |nearest_promoter_id=NR_031668 | ||
|nearest_refseq=NR_031668 | |nearest_refseq=NR_031668 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=14415225 | ||
| + | |start_of_center_position=14415226 | ||
| + | |strand=+ | ||
| + | |tata_box=-32(CTTTATATAGCA,+,0.00),27(GCTTTAAGGCTC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103971.1 | |tss_id=hg_103971.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14415226 |
|---|---|
| End of the center position in the TSS region: | 14415227 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -21350 |
|---|---|
| Nearest PromoterID: | NR_031668 |
| Entrez ID: | 100302116 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_031668 |
| Nearest Ensembl: | ENSG00000221371 |
| Gene Name: | MIR1265 |
| Gene Alias: | MIRN1265|hsa-mir-1265 |
| Gene Description: | microRNA 1265 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CTTTATATAGCA,+,0.00),27(GCTTTAAGGCTC,+,0.00) |
