Difference between revisions of "TSS:Hg 104002.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000378197. | + | |all_trans=ENST00000378197.5:0 NM_183005:0 NM_001097590:0 NM_006414:0 AK057006:0 U77664:0 BC029494:7 ENST00000378202.5:-8 ENST00000441850.1:28 ENST00000451677.1:-102 ENST00000378201.6:-124 AK223418:-136 ENST00000378203.5:-159 ENST00000616640.1:-159 NM_001265601:-159 AF079567:232 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=15097392 | |end=15097392 | ||
|end_of_center_position=15097366 | |end_of_center_position=15097366 | ||
| − | |entrez_id= | + | |entrez_id=10557 |
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=ribonuclease P/MRP subunit p38 |
|gene_id=10557 | |gene_id=10557 | ||
| − | |gene_name=ribonuclease P/MRP | + | |gene_name=ribonuclease P/MRP subunit p38 |
|gene_source=HGNC:30329 | |gene_source=HGNC:30329 | ||
|gene_symbol=RPP38 | |gene_symbol=RPP38 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:30329 | |hgnc_mgi_id=HGNC:30329 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000152464 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006414 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006414 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.94986 |
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=15097338 | |start=15097338 | ||
|start_of_center_position=15097365 | |start_of_center_position=15097365 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000378197. | + | |transcript_name=ENST00000378197.5 NM_183005 NM_001097590 NM_006414 AK057006 U77664 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104002.1 | |tss_id=hg_104002.1 | ||
Revision as of 17:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 15097365 |
|---|---|
| End of the center position in the TSS region: | 15097366 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000378197.5 NM_183005 NM_001097590 NM_006414 AK057006 U77664 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000378197.5:0 NM_183005:0 NM_001097590:0 NM_006414:0 AK057006:0 U77664:0 BC029494:7 ENST00000378202.5:-8 ENST00000441850.1:28 ENST00000451677.1:-102 ENST00000378201.6:-124 AK223418:-136 ENST00000378203.5:-159 ENST00000616640.1:-159 NM_001265601:-159 AF079567:232 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_006414 |
| Entrez ID: | 10557 |
| Nearest Unigene: | Hs.94986 |
| Nearest Refseq: | NM_006414 |
| Nearest Ensembl: | ENSG00000152464 |
| Gene Name: | ribonuclease P/MRP subunit p38 |
| Gene Alias: | - |
| Gene Description: | ribonuclease P/MRP subunit p38 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
