Difference between revisions of "TSS:Hg 104015.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=67476 |entrez_id=6251 |gc_percent=0.462687 |gene_alias=RSP-1 |gene_description=Ras suppressor protein 1 |gene_name=RSU1 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=67446 | ||
| + | |end=16749980 | ||
| + | |end_of_center_position=16749979 | ||
|entrez_id=6251 | |entrez_id=6251 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148484 | |nearest_ensembl=ENSG00000148484 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_012425 |
|nearest_refseq=NM_012425 | |nearest_refseq=NM_012425 | ||
|nearest_unigene=Hs.524161 | |nearest_unigene=Hs.524161 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=16749976 | ||
| + | |start_of_center_position=16749978 | ||
| + | |strand=+ | ||
| + | |tata_box=64(ATCTTTAAAAAG,-,0.00),66(CTTTAAAAAGTC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104015.1 | |tss_id=hg_104015.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:40, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16749978 |
|---|---|
| End of the center position in the TSS region: | 16749979 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 67446 |
|---|---|
| Nearest PromoterID: | NM_012425 |
| Entrez ID: | 6251 |
| Nearest Unigene: | Hs.524161 |
| Nearest Refseq: | NM_012425 |
| Nearest Ensembl: | ENSG00000148484 |
| Gene Name: | RSU1 |
| Gene Alias: | RSP-1 |
| Gene Description: | Ras suppressor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 64(ATCTTTAAAAAG,-,0.00),66(CTTTAAAAAGTC,+,0.00) |
