Difference between revisions of "TSS:Hg 10414.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001010847: | + | |all_trans=ENST00000376085.4:-158 NM_001010847:-158 BC016048:172 LP895739:-203 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=-158 |
| − | |distance_to_tss= | + | |distance_to_tss=163 |
|end=13513845 | |end=13513845 | ||
|end_of_center_position=13513840 | |end_of_center_position=13513840 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=13513839 | |start_of_center_position=13513839 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001010847 | + | |transcript_name=ENST00000376085.4 NM_001010847 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10414.1 | |tss_id=hg_10414.1 | ||
Revision as of 17:43, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13513839 |
|---|---|
| End of the center position in the TSS region: | 13513840 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376085.4 NM_001010847 |
|---|---|
| Distance: | -158 |
| Num_trans: | 4 |
| All_trans: | ENST00000376085.4:-158 NM_001010847:-158 BC016048:172 LP895739:-203 |
TATA-Box annotation
| Distance to TSS: | 163 |
|---|---|
| Nearest PromoterID: | NM_001010847 |
| Entrez ID: | 126755 |
| Nearest Unigene: | Hs.657356 |
| Nearest Refseq: | NM_001010847 |
| Nearest Ensembl: | ENSG00000162494 |
| Gene Name: | leucine rich repeat containing 38 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat containing 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
