Difference between revisions of "TSS:Hg 104143.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-97 |entrez_id=221078 |gc_percent=0.626866 |gene_alias=4933414E04Rik|ARL5B-AS1|NOPD1 |gene_description=NOP2/Sun RNA methyltrans...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ARL5B-AS1= | ||
| + | |NOPD1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-147 | ||
| + | |end=18651761 | ||
| + | |end_of_center_position=18651734 | ||
|entrez_id=221078 | |entrez_id=221078 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=4933414E04Rik | + | |gene_alias=4933414E04Rik{{!}}ARL5B-AS1{{!}}NOPD1 |
| − | |gene_description=NOP2/Sun RNA methyltransferase | + | |gene_description=NOP2/Sun RNA methyltransferase 6 |
|gene_name=NSUN6 | |gene_name=NSUN6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_182543 | |nearest_refseq=NM_182543 | ||
|nearest_unigene=Hs.396175 | |nearest_unigene=Hs.396175 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=18651706 | ||
| + | |start_of_center_position=18651733 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104143.1 | |tss_id=hg_104143.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:43, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 18651733 |
|---|---|
| End of the center position in the TSS region: | 18651734 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -147 |
|---|---|
| Nearest PromoterID: | NM_182543 |
| Entrez ID: | 221078 |
| Nearest Unigene: | Hs.396175 |
| Nearest Refseq: | NM_182543 |
| Nearest Ensembl: | ENSG00000241058 |
| Gene Name: | NSUN6 |
| Gene Alias: | 4933414E04Rik|ARL5B-AS1|NOPD1 |
| Gene Description: | NOP2/Sun RNA methyltransferase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
