Difference between revisions of "TSS:Hg 104145.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC024163:29 ENST00000377275.4:55 NM_178815:55 AK027275:55 AF494061:86 DQ896464:262 DQ893166:262 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=29 |
| − | |distance_to_tss=- | + | |distance_to_tss=-63 |
|end=18659376 | |end=18659376 | ||
|end_of_center_position=18659368 | |end_of_center_position=18659368 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_178815 | |nearest_refseq=NM_178815 | ||
|nearest_unigene=Hs.25362 | |nearest_unigene=Hs.25362 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=18659359 | |start=18659359 | ||
|start_of_center_position=18659367 | |start_of_center_position=18659367 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC024163 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104145.1 | |tss_id=hg_104145.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:43, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 18659367 |
|---|---|
| End of the center position in the TSS region: | 18659368 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC024163 |
|---|---|
| Distance: | 29 |
| Num_trans: | 7 |
| All_trans: | BC024163:29 ENST00000377275.4:55 NM_178815:55 AK027275:55 AF494061:86 DQ896464:262 DQ893166:262 |
TATA-Box annotation
| Distance to TSS: | -63 |
|---|---|
| Nearest PromoterID: | NM_178815 |
| Entrez ID: | 221079 |
| Nearest Unigene: | Hs.25362 |
| Nearest Refseq: | NM_178815 |
| Nearest Ensembl: | ENSG00000165997 |
| Gene Name: | ADP ribosylation factor like GTPase 5B |
| Gene Alias: | ARL8 |
| Gene Description: | ADP ribosylation factor like GTPase 5B |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
