Difference between revisions of "TSS:Hg 104213.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000377091.7:0 U13948:0 BC065376:0 BC080577:0 ENST00000650772.1:79 ENST00000377100.8:-83 ENST00000377072.8:-83 ENST00000307729.12:-83 NM_001195626:-83 ENST00000651298.1:105 AB209755:105 ENST00000471315.5:107 BC052798:113 ENST00000652497.1:115 BC094844:116 BC129946:118 ENST00000495130.5:129 NM_004641:-143 NM_001195630:-143 NM_001195628:-143 NM_001195627:-143 NR_136736:-143 BC032532:-150 ENST00000621220.4:284 ENST00000377059.7:284 CU687346:284 KJ892460:284 BC156206:284 BC156949:284 AY598745:284 LF383675:284 MA619252:284 ENST00000476557.5:341 ENST00000480415.6:388 ENST00000462999.5:388 ENST00000430455.2:388 ENST00000479634.1:388 AF060927:388 AF060934:388 AF060935:388 AF060936:388 AF060937:388 AF060938:388 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
| − | |gene_description= | + | |gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_id=8028 | |gene_id=8028 | ||
| − | |gene_name= | + | |gene_name=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_source=HGNC:16063 | |gene_source=HGNC:16063 | ||
|gene_symbol=MLLT10 | |gene_symbol=MLLT10 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:16063 | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195627 |
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| − | |num_trans= | + | |num_trans=43 |
|species=human | |species=human | ||
|start=21534314 | |start=21534314 | ||
|start_of_center_position=21534337 | |start_of_center_position=21534337 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000377091.7 U13948 BC065376 BC080577 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104213.1 | |tss_id=hg_104213.1 | ||
Revision as of 17:45, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21534337 |
|---|---|
| End of the center position in the TSS region: | 21534338 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377091.7 U13948 BC065376 BC080577 |
|---|---|
| Distance: | 0 |
| Num_trans: | 43 |
| All_trans: | ENST00000377091.7:0 U13948:0 BC065376:0 BC080577:0 ENST00000650772.1:79 ENST00000377100.8:-83 ENST00000377072.8:-83 ENST00000307729.12:-83 NM_001195626:-83 ENST00000651298.1:105 AB209755:105 ENST00000471315.5:107 BC052798:113 ENST00000652497.1:115 BC094844:116 BC129946:118 ENST00000495130.5:129 NM_004641:-143 NM_001195630:-143 NM_001195628:-143 NM_001195627:-143 NR_136736:-143 BC032532:-150 ENST00000621220.4:284 ENST00000377059.7:284 CU687346:284 KJ892460:284 BC156206:284 BC156949:284 AY598745:284 LF383675:284 MA619252:284 ENST00000476557.5:341 ENST00000480415.6:388 ENST00000462999.5:388 ENST00000430455.2:388 ENST00000479634.1:388 AF060927:388 AF060934:388 AF060935:388 AF060936:388 AF060937:388 AF060938:388 |
TATA-Box annotation
| Distance to TSS: | 166 |
|---|---|
| Nearest PromoterID: | NM_001195627 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Alias: | AF10 |
| Gene Description: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
