Difference between revisions of "TSS:Hg 104214.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000377091. | + | |all_trans=ENST00000377091.7:-23 BC065376:-25 BC080577:-25 U13948:-30 ENST00000650772.1:60 ENST00000651298.1:86 AB209755:86 ENST00000471315.5:88 BC052798:94 ENST00000652497.1:96 BC094844:97 BC129946:99 ENST00000495130.5:110 ENST00000377100.8:-136 ENST00000377072.8:-136 ENST00000307729.12:-136 NM_001195626:-136 NM_004641:-196 NM_001195630:-196 NM_001195628:-196 NM_001195627:-196 NR_136736:-196 BC032532:-203 ENST00000621220.4:265 ENST00000377059.7:265 CU687346:265 KJ892460:265 BC156206:265 BC156949:265 AY598745:265 LF383675:265 MA619252:265 ENST00000476557.5:322 ENST00000480415.6:369 ENST00000462999.5:369 ENST00000430455.2:369 ENST00000479634.1:369 AF060927:369 AF060934:369 AF060935:369 AF060936:369 AF060937:369 AF060938:369 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
| − | |gene_description= | + | |gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_id=8028 | |gene_id=8028 | ||
| − | |gene_name= | + | |gene_name=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_source=HGNC:16063 | |gene_source=HGNC:16063 | ||
|gene_symbol=MLLT10 | |gene_symbol=MLLT10 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:16063 | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195627 |
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| − | |num_trans= | + | |num_trans=43 |
|species=human | |species=human | ||
|start=21534367 | |start=21534367 | ||
|start_of_center_position=21534373 | |start_of_center_position=21534373 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000377091. | + | |transcript_name=ENST00000377091.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104214.1 | |tss_id=hg_104214.1 | ||
Revision as of 17:45, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21534373 |
|---|---|
| End of the center position in the TSS region: | 21534374 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377091.7 |
|---|---|
| Distance: | -23 |
| Num_trans: | 43 |
| All_trans: | ENST00000377091.7:-23 BC065376:-25 BC080577:-25 U13948:-30 ENST00000650772.1:60 ENST00000651298.1:86 AB209755:86 ENST00000471315.5:88 BC052798:94 ENST00000652497.1:96 BC094844:97 BC129946:99 ENST00000495130.5:110 ENST00000377100.8:-136 ENST00000377072.8:-136 ENST00000307729.12:-136 NM_001195626:-136 NM_004641:-196 NM_001195630:-196 NM_001195628:-196 NM_001195627:-196 NR_136736:-196 BC032532:-203 ENST00000621220.4:265 ENST00000377059.7:265 CU687346:265 KJ892460:265 BC156206:265 BC156949:265 AY598745:265 LF383675:265 MA619252:265 ENST00000476557.5:322 ENST00000480415.6:369 ENST00000462999.5:369 ENST00000430455.2:369 ENST00000479634.1:369 AF060927:369 AF060934:369 AF060935:369 AF060936:369 AF060937:369 AF060938:369 |
TATA-Box annotation
| Distance to TSS: | 202 |
|---|---|
| Nearest PromoterID: | NM_001195627 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Alias: | AF10 |
| Gene Description: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
