Difference between revisions of "TSS:Hg 104243.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PCGF4= | |PCGF4= | ||
|RNF51= | |RNF51= | ||
| − | |all_trans=ENST00000602523 | + | |all_trans=ENST00000602523.1:104 L13689:-106 BC011652:-132 ENST00000456675.2:230 ENST00000376663.8:-244 NM_005180:-244 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=104 | |distance=104 | ||
| − | |distance_to_tss= | + | |distance_to_tss=250 |
|end=22321355 | |end=22321355 | ||
|end_of_center_position=22321349 | |end_of_center_position=22321349 | ||
| Line 12: | Line 12: | ||
|flvi-2/bmi-1= | |flvi-2/bmi-1= | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=FLVI2/BMI1 | + | |gene_alias=FLVI2/BMI1{{!}}PCGF4{{!}}RNF51{{!}}flvi-2/bmi-1 |
| − | |gene_description= | + | |gene_description=BMI1 proto-oncogene, polycomb ring finger |
|gene_id=648 | |gene_id=648 | ||
| − | |gene_name= | + | |gene_name=BMI1 proto-oncogene, polycomb ring finger |
|gene_source=HGNC:1066 | |gene_source=HGNC:1066 | ||
|gene_symbol=BMI1 | |gene_symbol=BMI1 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_005180 | |nearest_refseq=NM_005180 | ||
|nearest_unigene=Hs.380403 | |nearest_unigene=Hs.380403 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=22321342 | |start=22321342 | ||
|start_of_center_position=22321348 | |start_of_center_position=22321348 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000602523 | + | |transcript_name=ENST00000602523.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104243.1 | |tss_id=hg_104243.1 | ||
Revision as of 17:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22321348 |
|---|---|
| End of the center position in the TSS region: | 22321349 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000602523.1 |
|---|---|
| Distance: | 104 |
| Num_trans: | 6 |
| All_trans: | ENST00000602523.1:104 L13689:-106 BC011652:-132 ENST00000456675.2:230 ENST00000376663.8:-244 NM_005180:-244 |
TATA-Box annotation
| Distance to TSS: | 250 |
|---|---|
| Nearest PromoterID: | NM_005180 |
| Entrez ID: | 648 |
| Nearest Unigene: | Hs.380403 |
| Nearest Refseq: | NM_005180 |
| Nearest Ensembl: | ENSG00000168283 |
| Gene Name: | BMI1 proto-oncogene, polycomb ring finger |
| Gene Alias: | FLVI2/BMI1|PCGF4|RNF51|flvi-2/bmi-1 |
| Gene Description: | BMI1 proto-oncogene, polycomb ring finger |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
