Difference between revisions of "TSS:Hg 104379.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=NA | ||
|distance_to_tss=-13181 | |distance_to_tss=-13181 | ||
| + | |end=25638533 | ||
| + | |end_of_center_position=25638531 | ||
|entrez_id=101929052 | |entrez_id=101929052 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| Line 9: | Line 13: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000280809 | |nearest_ensembl=ENSG00000280809 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_108067 |
|nearest_refseq=NR_108067 | |nearest_refseq=NR_108067 | ||
|nearest_unigene=Hs.128298 | |nearest_unigene=Hs.128298 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=25638528 | ||
| + | |start_of_center_position=25638530 | ||
| + | |strand=+ | ||
| + | |tata_box=-9(CCCTAAATAGGG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104379.1 | |tss_id=hg_104379.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:49, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 25638530 |
|---|---|
| End of the center position in the TSS region: | 25638531 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -13181 |
|---|---|
| Nearest PromoterID: | NR_108067 |
| Entrez ID: | 101929052 |
| Nearest Unigene: | Hs.128298 |
| Nearest Refseq: | NR_108067 |
| Nearest Ensembl: | ENSG00000280809 |
| Gene Name: | LINC00836 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 836 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -9(CCCTAAATAGGG,+,0.00) |
