Difference between revisions of "TSS:Hg 104393.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000428517.2 | + | |all_trans=ENST00000428517.2:9 BC029517:9 M81882:34 ENST00000259271.7:-49 M74826:-49 ENST00000376261.8:50 NM_001134366:50 BC126327:61 BC126329:61 AB527954:86 HQ258311:86 X69936:101 BC039038:-208 BC047899:-230 NM_000818:-407 ENST00000648567.1:421 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=9 | |distance=9 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-55 |
|end=26216724 | |end=26216724 | ||
|end_of_center_position=26216719 | |end_of_center_position=26216719 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000818 | |nearest_refseq=NM_000818 | ||
|nearest_unigene=Hs.231829 | |nearest_unigene=Hs.231829 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=26216713 | |start=26216713 | ||
|start_of_center_position=26216718 | |start_of_center_position=26216718 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000428517.2 | + | |transcript_name=ENST00000428517.2 BC029517 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104393.1 | |tss_id=hg_104393.1 | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 26216718 |
|---|---|
| End of the center position in the TSS region: | 26216719 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000428517.2 BC029517 |
|---|---|
| Distance: | 9 |
| Num_trans: | 16 |
| All_trans: | ENST00000428517.2:9 BC029517:9 M81882:34 ENST00000259271.7:-49 M74826:-49 ENST00000376261.8:50 NM_001134366:50 BC126327:61 BC126329:61 AB527954:86 HQ258311:86 X69936:101 BC039038:-208 BC047899:-230 NM_000818:-407 ENST00000648567.1:421 |
TATA-Box annotation
| Distance to TSS: | -55 |
|---|---|
| Nearest PromoterID: | NM_001134366 |
| Entrez ID: | 2572 |
| Nearest Unigene: | Hs.231829 |
| Nearest Refseq: | NM_000818 |
| Nearest Ensembl: | ENSG00000136750 |
| Gene Name: | glutamate decarboxylase 2 |
| Gene Alias: | GAD65 |
| Gene Description: | glutamate decarboxylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
