Difference between revisions of "TSS:Hg 104395.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC126327:0 BC126329:0 M81882:-9 AB527954:25 HQ258311:25 ENST00000428517.2 | + | |all_trans=ENST00000376261.8:0 NM_001134366:0 BC126327:0 BC126329:0 M81882:-9 AB527954:25 HQ258311:25 ENST00000428517.2:-34 BC029517:-34 X69936:40 ENST00000259271.7:-102 M74826:-102 BC039038:-261 BC047899:-283 ENST00000648567.1:360 NM_000818:-460 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=26216785 | |end=26216785 | ||
|end_of_center_position=26216776 | |end_of_center_position=26216776 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000818 | |nearest_refseq=NM_000818 | ||
|nearest_unigene=Hs.231829 | |nearest_unigene=Hs.231829 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=26216766 | |start=26216766 | ||
|start_of_center_position=26216775 | |start_of_center_position=26216775 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=BC126327 BC126329 | + | |transcript_name=ENST00000376261.8 NM_001134366 BC126327 BC126329 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104395.1 | |tss_id=hg_104395.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5VZ30 |
}} | }} | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 26216775 |
|---|---|
| End of the center position in the TSS region: | 26216776 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376261.8 NM_001134366 BC126327 BC126329 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000376261.8:0 NM_001134366:0 BC126327:0 BC126329:0 M81882:-9 AB527954:25 HQ258311:25 ENST00000428517.2:-34 BC029517:-34 X69936:40 ENST00000259271.7:-102 M74826:-102 BC039038:-261 BC047899:-283 ENST00000648567.1:360 NM_000818:-460 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001134366 |
| Entrez ID: | 2572 |
| Nearest Unigene: | Hs.231829 |
| Nearest Refseq: | NM_000818 |
| Nearest Ensembl: | ENSG00000136750 |
| Gene Name: | glutamate decarboxylase 2 |
| Gene Alias: | GAD65 |
| Gene Description: | glutamate decarboxylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
