Difference between revisions of "TSS:Hg 104405.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RARP1= | |RARP1= | ||
|RIAM= | |RIAM= | ||
| − | |all_trans=ENST00000376236. | + | |all_trans=ENST00000376236.9:161 NM_019043:161 AK308916:178 AK000812:198 ENST00000356785.4:245 BC035636:245 AK303597:-383 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=161 |
| − | |distance_to_tss=- | + | |distance_to_tss=-171 |
|end=26438180 | |end=26438180 | ||
|end_of_center_position=26438170 | |end_of_center_position=26438170 | ||
|entrez_id=54518 | |entrez_id=54518 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=INAG1 | + | |gene_alias=INAG1{{!}}PREL1{{!}}RARP1{{!}}RIAM |
|gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | |gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | ||
|gene_id=54518 | |gene_id=54518 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_019043 | |nearest_refseq=NM_019043 | ||
|nearest_unigene=Hs.310421 | |nearest_unigene=Hs.310421 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=26438159 | |start=26438159 | ||
|start_of_center_position=26438169 | |start_of_center_position=26438169 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000376236. | + | |transcript_name=ENST00000376236.9 NM_019043 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104405.1 | |tss_id=hg_104405.1 | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26438169 |
|---|---|
| End of the center position in the TSS region: | 26438170 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376236.9 NM_019043 |
|---|---|
| Distance: | 161 |
| Num_trans: | 7 |
| All_trans: | ENST00000376236.9:161 NM_019043:161 AK308916:178 AK000812:198 ENST00000356785.4:245 BC035636:245 AK303597:-383 |
TATA-Box annotation
| Distance to TSS: | -171 |
|---|---|
| Nearest PromoterID: | NM_019043 |
| Entrez ID: | 54518 |
| Nearest Unigene: | Hs.310421 |
| Nearest Refseq: | NM_019043 |
| Nearest Ensembl: | ENSG00000077420 |
| Gene Name: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Alias: | INAG1|PREL1|RARP1|RIAM |
| Gene Description: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
