Difference between revisions of "TSS:Hg 104427.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TPT= | |TPT= | ||
|TPT 1= | |TPT 1= | ||
| − | |all_trans= | + | |all_trans=NM_001321979:204 NM_001321978:204 AK024802:439 AK223414:439 AB210838:446 LF383676:446 MA619253:446 BC063635:476 ENST00000376215.10:481 NM_014317:481 KJ902358:491 BC049211:494 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=204 |
|distance_to_tss=-209 | |distance_to_tss=-209 | ||
|end=26697220 | |end=26697220 | ||
| Line 15: | Line 15: | ||
|entrez_id=23590 | |entrez_id=23590 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=COQ1 | + | |gene_alias=COQ1{{!}}COQ10D2{{!}}COQ1A{{!}}DPS{{!}}SPS{{!}}TPRT{{!}}TPT{{!}}TPT 1{{!}}hDPS1 |
|gene_description=decaprenyl diphosphate synthase subunit 1 | |gene_description=decaprenyl diphosphate synthase subunit 1 | ||
|gene_id=23590 | |gene_id=23590 | ||
| − | |gene_name= | + | |gene_name=decaprenyl diphosphate synthase subunit 1 |
|gene_source=HGNC:17759 | |gene_source=HGNC:17759 | ||
|gene_symbol=PDSS1 | |gene_symbol=PDSS1 | ||
| − | |gene_synonyms=COQ1 TPT | + | |gene_synonyms=COQ1 COQ1A TPT |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hDPS1= | |hDPS1= | ||
|hgnc_mgi_id=HGNC:17759 | |hgnc_mgi_id=HGNC:17759 | ||
|nearest_ensembl=ENSG00000148459 | |nearest_ensembl=ENSG00000148459 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001321978 |
|nearest_refseq=NM_014317 | |nearest_refseq=NM_014317 | ||
|nearest_unigene=Hs.558468 | |nearest_unigene=Hs.558468 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=26697209 | |start=26697209 | ||
|start_of_center_position=26697214 | |start_of_center_position=26697214 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001321979 NM_001321978 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104427.1 | |tss_id=hg_104427.1 | ||
Revision as of 17:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26697214 |
|---|---|
| End of the center position in the TSS region: | 26697215 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001321979 NM_001321978 |
|---|---|
| Distance: | 204 |
| Num_trans: | 12 |
| All_trans: | NM_001321979:204 NM_001321978:204 AK024802:439 AK223414:439 AB210838:446 LF383676:446 MA619253:446 BC063635:476 ENST00000376215.10:481 NM_014317:481 KJ902358:491 BC049211:494 |
TATA-Box annotation
| Distance to TSS: | -209 |
|---|---|
| Nearest PromoterID: | NM_001321978 |
| Entrez ID: | 23590 |
| Nearest Unigene: | Hs.558468 |
| Nearest Refseq: | NM_014317 |
| Nearest Ensembl: | ENSG00000148459 |
| Gene Name: | decaprenyl diphosphate synthase subunit 1 |
| Gene Alias: | COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 |
| Gene Description: | decaprenyl diphosphate synthase subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
