Difference between revisions of "TSS:Hg 10443.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-491 |entrez_id=79180 |gc_percent=0.59204 |gene_alias=SWS1 |gene_description=EF-hand domain family member D2 |gene_name=EFHD2 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000427824.1:-17 BC045184:-18 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss=- | + | |distance=-17 |
| + | |distance_to_tss=-484 | ||
| + | |end=15409416 | ||
| + | |end_of_center_position=15409405 | ||
|entrez_id=79180 | |entrez_id=79180 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_024329 | |nearest_refseq=NM_024329 | ||
|nearest_unigene=Hs.465374 | |nearest_unigene=Hs.465374 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=15409392 | ||
| + | |start_of_center_position=15409404 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000427824.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10443.1 | |tss_id=hg_10443.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:50, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 15409404 |
|---|---|
| End of the center position in the TSS region: | 15409405 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000427824.1 |
|---|---|
| Distance: | -17 |
| Num_trans: | 2 |
| All_trans: | ENST00000427824.1:-17 BC045184:-18 |
TATA-Box annotation
| Distance to TSS: | -484 |
|---|---|
| Nearest PromoterID: | NM_024329 |
| Entrez ID: | 79180 |
| Nearest Unigene: | Hs.465374 |
| Nearest Refseq: | NM_024329 |
| Nearest Ensembl: | ENSG00000142634 |
| Gene Name: | EFHD2 |
| Gene Alias: | SWS1 |
| Gene Description: | EF-hand domain family member D2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
