Difference between revisions of "TSS:Hg 104489.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PRO1741= | |PRO1741= | ||
|Wwp4= | |Wwp4= | ||
| − | |all_trans=ENST00000347934.8:8 | + | |all_trans=ENST00000347934.8:8 ENST00000420266.6:66 BC001654:-89 ENST00000354911.9:-156 NM_016628:-156 NM_100486:-156 ENST00000651885.1:195 AK290174:195 ENST00000651441.1:196 AK223600:199 BC004258:200 ENST00000679398.1:201 ENST00000424454.5:235 AF116666:235 JF432760:273 KJ902580:273 AB590052:275 ENST00000530865.5:292 AK297460:292 ENST00000442148.6:444 ENST00000448193.5:458 BC001026:-478 ENST00000375646.5:-490 ENST00000679570.1:-495 NM_100264:-495 ENST00000528491.5:-498 ENST00000681112.1:-498 AK225846:-499 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=8 | |distance=8 | ||
| − | |distance_to_tss= | + | |distance_to_tss=171 |
|end=28533305 | |end=28533305 | ||
|end_of_center_position=28533290 | |end_of_center_position=28533290 | ||
|entrez_id=51322 | |entrez_id=51322 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=BM-016 | + | |gene_alias=BM-016{{!}}DESSH{{!}}PRO1741{{!}}Wwp4 |
|gene_description=WW domain containing adaptor with coiled-coil | |gene_description=WW domain containing adaptor with coiled-coil | ||
|gene_id=51322 | |gene_id=51322 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_016628 | |nearest_refseq=NM_016628 | ||
|nearest_unigene=Hs.743224 | |nearest_unigene=Hs.743224 | ||
| − | |num_trans= | + | |num_trans=28 |
|species=human | |species=human | ||
|start=28533273 | |start=28533273 | ||
|start_of_center_position=28533289 | |start_of_center_position=28533289 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000347934.8 | + | |transcript_name=ENST00000347934.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104489.1 | |tss_id=hg_104489.1 | ||
Revision as of 17:51, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28533289 |
|---|---|
| End of the center position in the TSS region: | 28533290 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000347934.8 |
|---|---|
| Distance: | 8 |
| Num_trans: | 28 |
| All_trans: | ENST00000347934.8:8 ENST00000420266.6:66 BC001654:-89 ENST00000354911.9:-156 NM_016628:-156 NM_100486:-156 ENST00000651885.1:195 AK290174:195 ENST00000651441.1:196 AK223600:199 BC004258:200 ENST00000679398.1:201 ENST00000424454.5:235 AF116666:235 JF432760:273 KJ902580:273 AB590052:275 ENST00000530865.5:292 AK297460:292 ENST00000442148.6:444 ENST00000448193.5:458 BC001026:-478 ENST00000375646.5:-490 ENST00000679570.1:-495 NM_100264:-495 ENST00000528491.5:-498 ENST00000681112.1:-498 AK225846:-499 |
TATA-Box annotation
| Distance to TSS: | 171 |
|---|---|
| Nearest PromoterID: | NM_016628 |
| Entrez ID: | 51322 |
| Nearest Unigene: | Hs.743224 |
| Nearest Refseq: | NM_016628 |
| Nearest Ensembl: | ENSG00000095787 |
| Gene Name: | WW domain containing adaptor with coiled-coil |
| Gene Alias: | BM-016|DESSH|PRO1741|Wwp4 |
| Gene Description: | WW domain containing adaptor with coiled-coil |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
