Difference between revisions of "TSS:Hg 104490.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PRO1741= | |PRO1741= | ||
|Wwp4= | |Wwp4= | ||
| − | |all_trans=ENST00000347934.8:0 | + | |all_trans=ENST00000347934.8:0 ENST00000420266.6:8 BC001654:-123 ENST00000651885.1:137 AK290174:137 ENST00000651441.1:138 AK223600:141 BC004258:142 ENST00000679398.1:143 ENST00000424454.5:177 AF116666:177 ENST00000354911.9:-190 NM_016628:-190 NM_100486:-190 JF432760:215 KJ902580:215 AB590052:217 ENST00000530865.5:234 AK297460:234 ENST00000442148.6:386 ENST00000448193.5:400 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=217 |
|end=28533363 | |end=28533363 | ||
|end_of_center_position=28533336 | |end_of_center_position=28533336 | ||
|entrez_id=51322 | |entrez_id=51322 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=BM-016 | + | |gene_alias=BM-016{{!}}DESSH{{!}}PRO1741{{!}}Wwp4 |
|gene_description=WW domain containing adaptor with coiled-coil | |gene_description=WW domain containing adaptor with coiled-coil | ||
|gene_id=51322 | |gene_id=51322 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_016628 | |nearest_refseq=NM_016628 | ||
|nearest_unigene=Hs.743224 | |nearest_unigene=Hs.743224 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=28533307 | |start=28533307 | ||
|start_of_center_position=28533335 | |start_of_center_position=28533335 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000347934.8 | + | |transcript_name=ENST00000347934.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104490.1 | |tss_id=hg_104490.1 | ||
Revision as of 17:51, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28533335 |
|---|---|
| End of the center position in the TSS region: | 28533336 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000347934.8 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000347934.8:0 ENST00000420266.6:8 BC001654:-123 ENST00000651885.1:137 AK290174:137 ENST00000651441.1:138 AK223600:141 BC004258:142 ENST00000679398.1:143 ENST00000424454.5:177 AF116666:177 ENST00000354911.9:-190 NM_016628:-190 NM_100486:-190 JF432760:215 KJ902580:215 AB590052:217 ENST00000530865.5:234 AK297460:234 ENST00000442148.6:386 ENST00000448193.5:400 |
TATA-Box annotation
| Distance to TSS: | 217 |
|---|---|
| Nearest PromoterID: | NM_016628 |
| Entrez ID: | 51322 |
| Nearest Unigene: | Hs.743224 |
| Nearest Refseq: | NM_016628 |
| Nearest Ensembl: | ENSG00000095787 |
| Gene Name: | WW domain containing adaptor with coiled-coil |
| Gene Alias: | BM-016|DESSH|PRO1741|Wwp4 |
| Gene Description: | WW domain containing adaptor with coiled-coil |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
