Difference between revisions of "TSS:Hg 104508.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=339 |entrez_id=25805 |gc_percent=0.771144 |gene_alias=NMA |gene_description=BMP and activin membrane bound inhibitor |gene_name...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=KJ893463:57 AB463445:59 BT006820:59 U23070:-306 AK223065:-307 ENST00000375533.6:-309 NM_012342:-309 MP015357:-311 ENST00000497699.1:-320 BC019252:-320 AK290639:-327 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance_to_tss= | + | |distance=57 |
| + | |distance_to_tss=313 | ||
| + | |end=28677839 | ||
| + | |end_of_center_position=28677835 | ||
|entrez_id=25805 | |entrez_id=25805 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_012342 | |nearest_refseq=NM_012342 | ||
|nearest_unigene=Hs.533336 | |nearest_unigene=Hs.533336 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=28677829 | ||
| + | |start_of_center_position=28677834 | ||
| + | |strand=+ | ||
| + | |transcript_name=KJ893463 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104508.1 | |tss_id=hg_104508.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:52, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28677834 |
|---|---|
| End of the center position in the TSS region: | 28677835 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | KJ893463 |
|---|---|
| Distance: | 57 |
| Num_trans: | 11 |
| All_trans: | KJ893463:57 AB463445:59 BT006820:59 U23070:-306 AK223065:-307 ENST00000375533.6:-309 NM_012342:-309 MP015357:-311 ENST00000497699.1:-320 BC019252:-320 AK290639:-327 |
TATA-Box annotation
| Distance to TSS: | 313 |
|---|---|
| Nearest PromoterID: | NM_012342 |
| Entrez ID: | 25805 |
| Nearest Unigene: | Hs.533336 |
| Nearest Refseq: | NM_012342 |
| Nearest Ensembl: | ENSG00000095739 |
| Gene Name: | BAMBI |
| Gene Alias: | NMA |
| Gene Description: | BMP and activin membrane bound inhibitor |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
