Difference between revisions of "TSS:Hg 104518.1"
From referenceTSS
| Line 3: | Line 3: | ||
|LYZD1= | |LYZD1= | ||
|PRO1278= | |PRO1278= | ||
| − | |all_trans=ENST00000375500. | + | |all_trans=ENST00000375500.8:0 ENST00000649382.2:0 NM_032517:0 BC021730:13 AY358694:34 JF432492:36 KJ899809:36 |
|bA534G20.1= | |bA534G20.1= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-6 |
|end=29289082 | |end=29289082 | ||
|end_of_center_position=29289064 | |end_of_center_position=29289064 | ||
|entrez_id=84569 | |entrez_id=84569 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=KAAG648 | + | |gene_alias=KAAG648{{!}}LYC2{{!}}LYZD1{{!}}PRO1278{{!}}bA534G20.1 |
|gene_description=lysozyme like 1 | |gene_description=lysozyme like 1 | ||
|gene_id=84569 | |gene_id=84569 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=29289063 | |start_of_center_position=29289063 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000375500. | + | |transcript_name=ENST00000375500.8 ENST00000649382.2 NM_032517 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104518.1 | |tss_id=hg_104518.1 | ||
Revision as of 17:52, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29289063 |
|---|---|
| End of the center position in the TSS region: | 29289064 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375500.8 ENST00000649382.2 NM_032517 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000375500.8:0 ENST00000649382.2:0 NM_032517:0 BC021730:13 AY358694:34 JF432492:36 KJ899809:36 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_032517 |
| Entrez ID: | 84569 |
| Nearest Unigene: | Hs.558572 |
| Nearest Refseq: | NM_032517 |
| Nearest Ensembl: | ENSG00000120563 |
| Gene Name: | lysozyme like 1 |
| Gene Alias: | KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 |
| Gene Description: | lysozyme like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
