Difference between revisions of "TSS:Hg 104529.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=1355 |entrez_id=6840 |gc_percent=0.393035 |gene_alias=- |gene_description=supervillin |gene_name=SVIL |gene_type=protein-coding...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=1354 | ||
| + | |end=29633620 | ||
| + | |end_of_center_position=29633617 | ||
|entrez_id=6840 | |entrez_id=6840 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_003174 | |nearest_refseq=NM_003174 | ||
|nearest_unigene=Hs.499209 | |nearest_unigene=Hs.499209 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=29633613 | ||
| + | |start_of_center_position=29633616 | ||
| + | |strand=+ | ||
| + | |tata_box=-36(CTCTATAAATAC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104529.1 | |tss_id=hg_104529.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:52, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 29633616 |
|---|---|
| End of the center position in the TSS region: | 29633617 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1354 |
|---|---|
| Nearest PromoterID: | NM_021738 |
| Entrez ID: | 6840 |
| Nearest Unigene: | Hs.499209 |
| Nearest Refseq: | NM_003174 |
| Nearest Ensembl: | ENSG00000197321 |
| Gene Name: | SVIL |
| Gene Alias: | - |
| Gene Description: | supervillin |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(CTCTATAAATAC,-,0.00) |
