Difference between revisions of "TSS:Hg 104547.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TPL2= | |TPL2= | ||
|Tpl-2= | |Tpl-2= | ||
| − | |all_trans=ENST00000413724.5:-10 | + | |all_trans=ENST00000413724.5:-10 NM_001320961:-29 D14497:-411 ENST00000375322.2:-431 ENST00000263056.6:-491 NM_005204:-491 |
|c-COT= | |c-COT= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=-10 | |distance=-10 | ||
| − | |distance_to_tss= | + | |distance_to_tss=40 |
|end=30434698 | |end=30434698 | ||
|end_of_center_position=30434687 | |end_of_center_position=30434687 | ||
|entrez_id=1326 | |entrez_id=1326 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=AURA2 | + | |gene_alias=AURA2{{!}}COT{{!}}EST{{!}}ESTF{{!}}MEKK8{{!}}TPL2{{!}}Tpl-2{{!}}c-COT |
|gene_description=mitogen-activated protein kinase kinase kinase 8 | |gene_description=mitogen-activated protein kinase kinase kinase 8 | ||
|gene_id=1326 | |gene_id=1326 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_005204 | |nearest_refseq=NM_005204 | ||
|nearest_unigene=Hs.432453 | |nearest_unigene=Hs.432453 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=30434674 | |start=30434674 | ||
|start_of_center_position=30434686 | |start_of_center_position=30434686 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000413724.5 | + | |transcript_name=ENST00000413724.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104547.1 | |tss_id=hg_104547.1 | ||
Revision as of 17:53, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30434686 |
|---|---|
| End of the center position in the TSS region: | 30434687 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000413724.5 |
|---|---|
| Distance: | -10 |
| Num_trans: | 6 |
| All_trans: | ENST00000413724.5:-10 NM_001320961:-29 D14497:-411 ENST00000375322.2:-431 ENST00000263056.6:-491 NM_005204:-491 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001320961 |
| Entrez ID: | 1326 |
| Nearest Unigene: | Hs.432453 |
| Nearest Refseq: | NM_005204 |
| Nearest Ensembl: | ENSG00000107968 |
| Gene Name: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Alias: | AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT |
| Gene Description: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
