Difference between revisions of "TSS:Hg 104588.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=41865 |entrez_id=119180 |gc_percent=0.61194 |gene_alias=LYZD2 |gene_description=lysozyme like 2 |gene_name=LYZL2 |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000648759.1:-140 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=-140 |
| + | |distance_to_tss=41900 | ||
| + | |end=30587860 | ||
| + | |end_of_center_position=30587853 | ||
|entrez_id=119180 | |entrez_id=119180 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_183058 | |nearest_refseq=NM_183058 | ||
|nearest_unigene=Hs.522610 | |nearest_unigene=Hs.522610 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=30587845 | ||
| + | |start_of_center_position=30587852 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000648759.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104588.1 | |tss_id=hg_104588.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:54, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 30587852 |
|---|---|
| End of the center position in the TSS region: | 30587853 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000648759.1 |
|---|---|
| Distance: | -140 |
| Num_trans: | 1 |
| All_trans: | ENST00000648759.1:-140 |
TATA-Box annotation
| Distance to TSS: | 41900 |
|---|---|
| Nearest PromoterID: | NM_183058 |
| Entrez ID: | 119180 |
| Nearest Unigene: | Hs.522610 |
| Nearest Refseq: | NM_183058 |
| Nearest Ensembl: | ENSG00000151033 |
| Gene Name: | LYZL2 |
| Gene Alias: | LYZD2 |
| Gene Description: | lysozyme like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
