Difference between revisions of "TSS:Hg 104606.1"
From referenceTSS
| Line 8: | Line 8: | ||
|ZFHEP= | |ZFHEP= | ||
|ZFHX1A= | |ZFHX1A= | ||
| − | |all_trans=ENST00000558655.5:0 | + | |all_trans=ENST00000558655.5:0 NM_001323661:0 NM_001323660:0 NM_001323659:0 AK299666:0 ENST00000561061.5:43 AK309399:43 ENST00000561212.5:-418 ENST00000558863.5:-431 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=31320563 | |end=31320563 | ||
|end_of_center_position=31320554 | |end_of_center_position=31320554 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=AREB6 | + | |gene_alias=AREB6{{!}}BZP{{!}}DELTAEF1{{!}}FECD6{{!}}NIL2A{{!}}PPCD3{{!}}TCF8{{!}}ZFHEP{{!}}ZFHX1A |
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
|gene_id=6935 | |gene_id=6935 | ||
| Line 27: | Line 27: | ||
|hgnc_mgi_id=HGNC:11642 | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323661 |
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=31320543 | |start=31320543 | ||
|start_of_center_position=31320553 | |start_of_center_position=31320553 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000558655.5 | + | |transcript_name=ENST00000558655.5 NM_001323661 NM_001323660 NM_001323659 AK299666 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104606.1 | |tss_id=hg_104606.1 | ||
Revision as of 17:54, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 31320553 |
|---|---|
| End of the center position in the TSS region: | 31320554 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000558655.5 NM_001323661 NM_001323660 NM_001323659 AK299666 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000558655.5:0 NM_001323661:0 NM_001323660:0 NM_001323659:0 AK299666:0 ENST00000561061.5:43 AK309399:43 ENST00000561212.5:-418 ENST00000558863.5:-431 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001323661 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
