Difference between revisions of "TSS:Hg 104609.1"
From referenceTSS
| Line 8: | Line 8: | ||
|ZFHEP= | |ZFHEP= | ||
|ZFHX1A= | |ZFHX1A= | ||
| − | |all_trans=ENST00000606161 | + | |all_trans=NM_001323673:0 NM_001323677:0 NM_001323676:0 NM_001323675:0 NM_001323672:0 NM_001323671:0 ENST00000606161.1:18 ENST00000606671.5:-35 AK296244:-164 ENST00000557827.5:-182 AK308785:-182 AK311116:-257 ENST00000558832.5:338 NM_001128128:-455 NM_001323678:-455 NM_001323666:-455 NM_001323665:-455 NM_001323664:-455 NM_001323663:-455 NM_001323662:-455 NM_001174094:-455 AK311201:-468 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=31321672 | |end=31321672 | ||
|end_of_center_position=31321664 | |end_of_center_position=31321664 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=AREB6 | + | |gene_alias=AREB6{{!}}BZP{{!}}DELTAEF1{{!}}FECD6{{!}}NIL2A{{!}}PPCD3{{!}}TCF8{{!}}ZFHEP{{!}}ZFHX1A |
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
|gene_id=6935 | |gene_id=6935 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=human | |species=human | ||
|start=31321655 | |start=31321655 | ||
|start_of_center_position=31321663 | |start_of_center_position=31321663 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001323673 NM_001323677 NM_001323676 NM_001323675 NM_001323672 NM_001323671 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104609.1 | |tss_id=hg_104609.1 | ||
Revision as of 17:54, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 31321663 |
|---|---|
| End of the center position in the TSS region: | 31321664 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001323673 NM_001323677 NM_001323676 NM_001323675 NM_001323672 NM_001323671 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | NM_001323673:0 NM_001323677:0 NM_001323676:0 NM_001323675:0 NM_001323672:0 NM_001323671:0 ENST00000606161.1:18 ENST00000606671.5:-35 AK296244:-164 ENST00000557827.5:-182 AK308785:-182 AK311116:-257 ENST00000558832.5:338 NM_001128128:-455 NM_001323678:-455 NM_001323666:-455 NM_001323665:-455 NM_001323664:-455 NM_001323663:-455 NM_001323662:-455 NM_001174094:-455 AK311201:-468 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001323675 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
