Difference between revisions of "TSS:Hg 104629.1"
From referenceTSS
| Line 4: | Line 4: | ||
|BioT2-C= | |BioT2-C= | ||
|C10orf68= | |C10orf68= | ||
| − | |all_trans=BC022020:-74 BC042672:-93 ENST00000545067. | + | |all_trans=BC022020:-74 GQ891461:-74 BC042672:-93 ENST00000545067.6:98 BX647771:98 ENST00000476558.7:-110 ENST00000277657.12:-110 ENST00000362006.11:-110 NM_001026383:-110 NM_145023:-110 NM_001321115:-110 NR_109827:-110 NR_109826:-110 AK057324:-110 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=-74 | |distance=-74 | ||
| − | |distance_to_tss= | + | |distance_to_tss=129 |
|end=32446289 | |end=32446289 | ||
|end_of_center_position=32446270 | |end_of_center_position=32446270 | ||
|entrez_id=79741 | |entrez_id=79741 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=BIOT2 | + | |gene_alias=BIOT2{{!}}BioT2-A{{!}}BioT2-B{{!}}BioT2-C{{!}}C10orf68 |
|gene_description=coiled-coil domain containing 7 | |gene_description=coiled-coil domain containing 7 | ||
|gene_id=79741 | |gene_id=79741 | ||
| Line 22: | Line 22: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:26533 | |hgnc_mgi_id=HGNC:26533 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000216937 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001321115 |
|nearest_refseq=NM_024688 | |nearest_refseq=NM_024688 | ||
|nearest_unigene=Hs.585464 | |nearest_unigene=Hs.585464 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=32446249 | |start=32446249 | ||
|start_of_center_position=32446269 | |start_of_center_position=32446269 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=BC022020 | + | |transcript_name=BC022020 GQ891461 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104629.1 | |tss_id=hg_104629.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A384NKY2 |
}} | }} | ||
Revision as of 17:55, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 32446269 |
|---|---|
| End of the center position in the TSS region: | 32446270 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC022020 GQ891461 |
|---|---|
| Distance: | -74 |
| Num_trans: | 14 |
| All_trans: | BC022020:-74 GQ891461:-74 BC042672:-93 ENST00000545067.6:98 BX647771:98 ENST00000476558.7:-110 ENST00000277657.12:-110 ENST00000362006.11:-110 NM_001026383:-110 NM_145023:-110 NM_001321115:-110 NR_109827:-110 NR_109826:-110 AK057324:-110 |
TATA-Box annotation
| Distance to TSS: | 129 |
|---|---|
| Nearest PromoterID: | NM_001321115 |
| Entrez ID: | 79741 |
| Nearest Unigene: | Hs.585464 |
| Nearest Refseq: | NM_024688 |
| Nearest Ensembl: | ENSG00000216937 |
| Gene Name: | coiled-coil domain containing 7 |
| Gene Alias: | BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 |
| Gene Description: | coiled-coil domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
