Difference between revisions of "TSS:Hg 104649.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 8: | Line 8: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-17509 |
|end=33134327 | |end=33134327 | ||
| − | |entrez_id= | + | |end_of_center_position=33134317 |
| + | |entrez_id=101929447 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias= | + | |gene_alias=TCONS_00018476{{!}}linc-ITGB1 |
| − | |gene_description= | + | |gene_description=ITGB1 adjacent tumor promoting lncRNA |
| − | |gene_name= | + | |gene_name=IATPR |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_160030 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_160030 |
| − | |nearest_unigene= | + | |nearest_unigene= |
|num_trans=0 | |num_trans=0 | ||
|species=human | |species=human | ||
|start=33134305 | |start=33134305 | ||
| + | |start_of_center_position=33134316 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 17:55, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33134316 |
|---|---|
| End of the center position in the TSS region: | 33134317 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -17509 |
|---|---|
| Nearest PromoterID: | NR_160030 |
| Entrez ID: | 101929447 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_160030 |
| Nearest Ensembl: | |
| Gene Name: | IATPR |
| Gene Alias: | TCONS_00018476|linc-ITGB1 |
| Gene Description: | ITGB1 adjacent tumor promoting lncRNA |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
