Difference between revisions of "TSS:Hg 104651.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |FNRB= | ||
| + | |GPIIA= | ||
| + | |MDF2= | ||
| + | |MSK12= | ||
| + | |VLA-BETA= | ||
| + | |VLAB= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| − | |entrez_id= | + | |distance_to_tss=-22485 |
| + | |end=33139299 | ||
| + | |end_of_center_position=33139292 | ||
| + | |entrez_id=101929447 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias= | + | |gene_alias=TCONS_00018476{{!}}linc-ITGB1 |
| − | |gene_description= | + | |gene_description=ITGB1 adjacent tumor promoting lncRNA |
| − | |gene_name= | + | |gene_name=IATPR |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_160030 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_160030 |
| − | |nearest_unigene= | + | |nearest_unigene= |
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=33139284 | ||
| + | |start_of_center_position=33139291 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104651.1 | |tss_id=hg_104651.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:55, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33139291 |
|---|---|
| End of the center position in the TSS region: | 33139292 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -22485 |
|---|---|
| Nearest PromoterID: | NR_160030 |
| Entrez ID: | 101929447 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_160030 |
| Nearest Ensembl: | |
| Gene Name: | IATPR |
| Gene Alias: | TCONS_00018476|linc-ITGB1 |
| Gene Description: | ITGB1 adjacent tumor promoting lncRNA |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
