Difference between revisions of "TSS:Hg 104664.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ICER= | |ICER= | ||
| − | |all_trans=ENST00000374721.7 | + | |all_trans=ENST00000374721.7:0 ENST00000496626.5:13 NM_001881:13 ENST00000474362.5:-17 ENST00000482646.5:45 ENST00000489388.5:78 ENST00000374726.7:95 BC066342:95 ENST00000461968.5:120 ENST00000490460.5:131 BC017117:149 ENST00000466251.5:161 NM_001267563:173 NM_001267562:173 NM_001352467:173 NM_001352466:173 NM_001352465:173 NM_183013:173 ENST00000482633.5:220 ENST00000495960.5:235 ENST00000429130.7:263 ENST00000469949.6:274 ENST00000460270.5:289 ENST00000496019.5:328 ENST00000354759.7:334 D14825:334 NM_181571:399 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 10: | Line 10: | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=CREM-2 | + | |gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_id=1390 | |gene_id=1390 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:2352 | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001881 |
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=human | |species=human | ||
|start=35126807 | |start=35126807 | ||
|start_of_center_position=35126817 | |start_of_center_position=35126817 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000374721.7 | + | |transcript_name=ENST00000374721.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104664.1 | |tss_id=hg_104664.1 | ||
Revision as of 17:55, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35126817 |
|---|---|
| End of the center position in the TSS region: | 35126818 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374721.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000374721.7:0 ENST00000496626.5:13 NM_001881:13 ENST00000474362.5:-17 ENST00000482646.5:45 ENST00000489388.5:78 ENST00000374726.7:95 BC066342:95 ENST00000461968.5:120 ENST00000490460.5:131 BC017117:149 ENST00000466251.5:161 NM_001267563:173 NM_001267562:173 NM_001352467:173 NM_001352466:173 NM_001352465:173 NM_183013:173 ENST00000482633.5:220 ENST00000495960.5:235 ENST00000429130.7:263 ENST00000469949.6:274 ENST00000460270.5:289 ENST00000496019.5:328 ENST00000354759.7:334 D14825:334 NM_181571:399 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_001881 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2|ICER|hCREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
