Difference between revisions of "TSS:Hg 104678.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=9274 |
|end=35184875 | |end=35184875 | ||
|end_of_center_position=35184868 | |end_of_center_position=35184868 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.343284 | |gc_percent=0.343284 | ||
| − | |gene_alias=CREM-2 | + | |gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_name=CREM | |gene_name=CREM | ||
| Line 15: | Line 15: | ||
|hCREM-2= | |hCREM-2= | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_182770 |
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=35184867 | |start_of_center_position=35184867 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-30(ACCTATTTAGGG,-,0.00),28(TTATTTAAAAGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35184867 |
|---|---|
| End of the center position in the TSS region: | 35184868 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 9274 |
|---|---|
| Nearest PromoterID: | NM_182770 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | CREM |
| Gene Alias: | CREM-2|ICER|hCREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.343284 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -30(ACCTATTTAGGG,-,0.00),28(TTATTTAAAAGC,-,0.00) |
