Difference between revisions of "TSS:Hg 104685.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CCNX= | |CCNX= | ||
|CFP1= | |CFP1= | ||
| − | |all_trans=AK314666:43 | + | |all_trans=ENST00000374704.8:25 NM_001282854:25 NM_145012:25 AK314666:43 ENST00000265375.13:390 ENST00000339497.7:390 NM_001282853:390 NM_001282852:390 AF413522:390 AY504868:390 LF385229:390 MA620806:390 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance= | + | |distance=25 |
| − | |distance_to_tss=- | + | |distance_to_tss=-33 |
|end=35336484 | |end=35336484 | ||
|end_of_center_position=35336476 | |end_of_center_position=35336476 | ||
|entrez_id=219771 | |entrez_id=219771 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=C10orf9 | + | |gene_alias=C10orf9{{!}}CBCP1{{!}}CCNX{{!}}CFP1 |
|gene_description=cyclin Y | |gene_description=cyclin Y | ||
|gene_id=219771 | |gene_id=219771 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_145012 | |nearest_refseq=NM_145012 | ||
|nearest_unigene=Hs.14745 | |nearest_unigene=Hs.14745 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=35336467 | |start=35336467 | ||
|start_of_center_position=35336475 | |start_of_center_position=35336475 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000374704.8 NM_001282854 NM_145012 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104685.1 | |tss_id=hg_104685.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8ND76 |
}} | }} | ||
Revision as of 17:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35336475 |
|---|---|
| End of the center position in the TSS region: | 35336476 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374704.8 NM_001282854 NM_145012 |
|---|---|
| Distance: | 25 |
| Num_trans: | 12 |
| All_trans: | ENST00000374704.8:25 NM_001282854:25 NM_145012:25 AK314666:43 ENST00000265375.13:390 ENST00000339497.7:390 NM_001282853:390 NM_001282852:390 AF413522:390 AY504868:390 LF385229:390 MA620806:390 |
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NM_145012 |
| Entrez ID: | 219771 |
| Nearest Unigene: | Hs.14745 |
| Nearest Refseq: | NM_145012 |
| Nearest Ensembl: | ENSG00000108100 |
| Gene Name: | cyclin Y |
| Gene Alias: | C10orf9|CBCP1|CCNX|CFP1 |
| Gene Description: | cyclin Y |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
