Difference between revisions of "TSS:Hg 104687.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CCNX= | |CCNX= | ||
|CFP1= | |CFP1= | ||
| − | |all_trans=AK314666:-94 ENST00000374704. | + | |all_trans=AK314666:-94 ENST00000374704.8:-112 NM_001282854:-112 NM_145012:-112 ENST00000265375.13:183 ENST00000339497.7:183 NM_001282853:183 NM_001282852:183 AF413522:183 AY504868:183 LF385229:183 MA620806:183 AK303283:329 AL834355:336 BC094815:349 BC069224:357 ENST00000492478.5:361 BC050310:361 AF465728:362 AF465729:362 AB462996:363 AM392857:363 LF342612:367 MA578189:367 LF342611:465 MA578188:465 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
|distance=-94 | |distance=-94 | ||
| − | |distance_to_tss= | + | |distance_to_tss=147 |
|end=35336691 | |end=35336691 | ||
|end_of_center_position=35336656 | |end_of_center_position=35336656 | ||
|entrez_id=219771 | |entrez_id=219771 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=C10orf9 | + | |gene_alias=C10orf9{{!}}CBCP1{{!}}CCNX{{!}}CFP1 |
|gene_description=cyclin Y | |gene_description=cyclin Y | ||
|gene_id=219771 | |gene_id=219771 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:23354 | |hgnc_mgi_id=HGNC:23354 | ||
|nearest_ensembl=ENSG00000108100 | |nearest_ensembl=ENSG00000108100 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282854 |
|nearest_refseq=NM_145012 | |nearest_refseq=NM_145012 | ||
|nearest_unigene=Hs.14745 | |nearest_unigene=Hs.14745 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=35336620 | |start=35336620 | ||
Revision as of 17:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35336655 |
|---|---|
| End of the center position in the TSS region: | 35336656 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK314666 |
|---|---|
| Distance: | -94 |
| Num_trans: | 26 |
| All_trans: | AK314666:-94 ENST00000374704.8:-112 NM_001282854:-112 NM_145012:-112 ENST00000265375.13:183 ENST00000339497.7:183 NM_001282853:183 NM_001282852:183 AF413522:183 AY504868:183 LF385229:183 MA620806:183 AK303283:329 AL834355:336 BC094815:349 BC069224:357 ENST00000492478.5:361 BC050310:361 AF465728:362 AF465729:362 AB462996:363 AM392857:363 LF342612:367 MA578189:367 LF342611:465 MA578188:465 |
TATA-Box annotation
| Distance to TSS: | 147 |
|---|---|
| Nearest PromoterID: | NM_001282854 |
| Entrez ID: | 219771 |
| Nearest Unigene: | Hs.14745 |
| Nearest Refseq: | NM_145012 |
| Nearest Ensembl: | ENSG00000108100 |
| Gene Name: | cyclin Y |
| Gene Alias: | C10orf9|CBCP1|CCNX|CFP1 |
| Gene Description: | cyclin Y |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
