Difference between revisions of "TSS:Hg 104719.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-145 |entrez_id=57209 |gc_percent=0.676617 |gene_alias=bA162G10.3 |gene_description=zinc finger protein 248 |gene_name=ZNF248 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000429214.1:-30 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=-30 | ||
|distance_to_tss=-145 | |distance_to_tss=-145 | ||
| + | |end=37857792 | ||
| + | |end_of_center_position=37857781 | ||
|entrez_id=57209 | |entrez_id=57209 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| Line 9: | Line 14: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000198105 | |nearest_ensembl=ENSG00000198105 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_148006 |
|nearest_refseq=NM_021045 | |nearest_refseq=NM_021045 | ||
|nearest_unigene=Hs.528423 | |nearest_unigene=Hs.528423 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=37857769 | ||
| + | |start_of_center_position=37857780 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000429214.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104719.1 | |tss_id=hg_104719.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:57, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 37857780 |
|---|---|
| End of the center position in the TSS region: | 37857781 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000429214.1 |
|---|---|
| Distance: | -30 |
| Num_trans: | 1 |
| All_trans: | ENST00000429214.1:-30 |
TATA-Box annotation
| Distance to TSS: | -145 |
|---|---|
| Nearest PromoterID: | NR_148006 |
| Entrez ID: | 57209 |
| Nearest Unigene: | Hs.528423 |
| Nearest Refseq: | NM_021045 |
| Nearest Ensembl: | ENSG00000198105 |
| Gene Name: | ZNF248 |
| Gene Alias: | bA162G10.3 |
| Gene Description: | zinc finger protein 248 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
