Difference between revisions of "TSS:Hg 104723.1"
From referenceTSS
| Line 7: | Line 7: | ||
|ZNF33= | |ZNF33= | ||
|ZZAPK= | |ZZAPK= | ||
| − | |all_trans=D31763:-462 ENST00000478556 | + | |all_trans=D31763:-462 ENST00000478556.1:-476 ENST00000476504.5:-482 ENST00000469037.2:-489 AK027057:-489 BC017760:-494 ENST00000432900.7:-500 NM_006974:-500 NM_001324175:-500 NM_001278179:-500 NM_001278176:-500 NM_001324178:-500 NM_001324177:-500 NM_006954:-500 NR_136710:-500 NR_136709:-500 NM_001278175:-500 NM_001278174:-500 NM_001324176:-500 NM_001278177:-500 NM_001278171:-500 NM_001278170:-500 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=-462 | |distance=-462 | ||
| − | |distance_to_tss= | + | |distance_to_tss=510 |
|end=38011196 | |end=38011196 | ||
|end_of_center_position=38011186 | |end_of_center_position=38011186 | ||
|entrez_id=7581 | |entrez_id=7581 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=KOX2 | + | |gene_alias=KOX2{{!}}KOX31{{!}}KOX5{{!}}NF11A{{!}}ZNF11{{!}}ZNF11A{{!}}ZNF33{{!}}ZZAPK |
|gene_description=zinc finger protein 33A | |gene_description=zinc finger protein 33A | ||
|gene_id=7581 | |gene_id=7581 | ||
| Line 26: | Line 26: | ||
|hgnc_mgi_id=HGNC:13096 | |hgnc_mgi_id=HGNC:13096 | ||
|nearest_ensembl=ENSG00000189180 | |nearest_ensembl=ENSG00000189180 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001324177 |
|nearest_refseq=NM_006954 | |nearest_refseq=NM_006954 | ||
|nearest_unigene=Hs.435774 | |nearest_unigene=Hs.435774 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=human | |species=human | ||
|start=38011174 | |start=38011174 | ||
Revision as of 17:57, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 38011185 |
|---|---|
| End of the center position in the TSS region: | 38011186 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | D31763 |
|---|---|
| Distance: | -462 |
| Num_trans: | 22 |
| All_trans: | D31763:-462 ENST00000478556.1:-476 ENST00000476504.5:-482 ENST00000469037.2:-489 AK027057:-489 BC017760:-494 ENST00000432900.7:-500 NM_006974:-500 NM_001324175:-500 NM_001278179:-500 NM_001278176:-500 NM_001324178:-500 NM_001324177:-500 NM_006954:-500 NR_136710:-500 NR_136709:-500 NM_001278175:-500 NM_001278174:-500 NM_001324176:-500 NM_001278177:-500 NM_001278171:-500 NM_001278170:-500 |
TATA-Box annotation
| Distance to TSS: | 510 |
|---|---|
| Nearest PromoterID: | NM_001324177 |
| Entrez ID: | 7581 |
| Nearest Unigene: | Hs.435774 |
| Nearest Refseq: | NM_006954 |
| Nearest Ensembl: | ENSG00000189180 |
| Gene Name: | zinc finger protein 33A |
| Gene Alias: | KOX2|KOX31|KOX5|NF11A|ZNF11|ZNF11A|ZNF33|ZZAPK |
| Gene Description: | zinc finger protein 33A |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
