Difference between revisions of "TSS:Hg 104761.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000480678.1:0 ENST00000430885.5:0 ENST00000374435.3:0 ENST00000361807.8:0 NM_001318141:0 NM_001318142:0 NM_001318143:0 NM_001318140:0 NM_145312:0 AK299707:0 AK074679:0 BC014161:0 BX648149:16 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-13 |
|end=43606448 | |end=43606448 | ||
|end_of_center_position=43606426 | |end_of_center_position=43606426 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23440 | |hgnc_mgi_id=HGNC:23440 | ||
|nearest_ensembl=ENSG00000198298 | |nearest_ensembl=ENSG00000198298 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_145312 |
|nearest_refseq=NM_145312 | |nearest_refseq=NM_145312 | ||
|nearest_unigene=Hs.147440 | |nearest_unigene=Hs.147440 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=43606402 | |start=43606402 | ||
|start_of_center_position=43606425 | |start_of_center_position=43606425 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000480678.1 ENST00000430885.5 ENST00000374435.3 ENST00000361807.8 NM_001318141 NM_001318142 NM_001318143 NM_001318140 NM_145312 AK299707 AK074679 BC014161 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104761.1 | |tss_id=hg_104761.1 | ||
Revision as of 17:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43606425 |
|---|---|
| End of the center position in the TSS region: | 43606426 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000480678.1 ENST00000430885.5 ENST00000374435.3 ENST00000361807.8 NM_001318141 NM_001318142 NM_001318143 NM_001318140 NM_145312 AK299707 AK074679 BC014161 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000480678.1:0 ENST00000430885.5:0 ENST00000374435.3:0 ENST00000361807.8:0 NM_001318141:0 NM_001318142:0 NM_001318143:0 NM_001318140:0 NM_145312:0 AK299707:0 AK074679:0 BC014161:0 BX648149:16 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_145312 |
| Entrez ID: | 220992 |
| Nearest Unigene: | Hs.147440 |
| Nearest Refseq: | NM_145312 |
| Nearest Ensembl: | ENSG00000198298 |
| Gene Name: | zinc finger protein 485 |
| Gene Alias: | - |
| Gene Description: | zinc finger protein 485 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
